Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
ATAC-seq
23
total RNA-seq
5
ChIP-seq
4
DNase-seq
4
pCHi-C
Assay category
44
DNA accessibility
23
Transcription
5
DNA binding
Target of assay
3
histone
3
histone modification
3
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
39
February, 2023
21
October, 2019
8
February, 2021
7
June, 2019
1
February, 2020
July, 2019
Available data
41
bed narrowPeak
15
bam
6
bigBed narrowPeak
6
bigWig
5
tsv
4
bed bed3
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
txt
Organism
76
Homo sapiens
Biosample type
72
tissue
4
primary cell
Organ
862
pancreas
739
liver
618
connective tissue
467
epithelium
459
adipose tissue
328
kidney
311
heart
198
brain
179
vasculature
174
blood vessel
159
bone element
124
artery
83
limb
69
blood
69
bodily fluid
66
musculature of body
60
eye
33
embryo
27
nerve
21
spleen
20
lung
18
ureter
16
skeleton
13
vein
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
76
AMP
Genome assembly (visualization)
45
hg19
14
GRCh38
Lab
76
AMP-T2D consortium
month_released!
July, 2019
target.investigated_as!
broad histone mark
lab.title!
Struan F.A. Grant, CHOP
BIOSAMPLE
ASSAY
76 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
DNase-seq
pCHi-C
tissue
islet of Langerhans
1
14
2
4
retina
15
3
3
pigmented layer of retina
12
2
acetabular part of hip bone
1
1
ilium
1
1
+ See 10 more…
primary cell
retinal pigment epithelial cell
3
1
See all biosamples
Download