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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
178
ChIP-seq
Assay category
178
DNA binding
Target of assay
178
histone
178
histone modification
91
broad histone mark
87
narrow histone mark
26
control
17
transcription factor
6
RNA binding protein
2
nucleotide modification
Date released
96
August, 2017
May, 2021
35
May, 2024
23
October, 2019
13
November, 2017
6
October, 2017
4
August, 2021
1
April, 2019
Available data
665
bigWig
649
bed narrowPeak
bam
362
bigBed narrowPeak
233
tagAlign
179
fastq
61
bed broadPeak
26
bigBed broadPeak
22
bed bed3+
1
tagAlign bed3+
Organism
178
Homo sapiens
Biosample type
162
tissue
13
in vitro differentiated cells
3
cell line
Organ
44
connective tissue
36
heart
31
adipose tissue
23
liver
21
brain
19
musculature of body
14
pancreas
4
gonad
4
ovary
2
eye
1
limb
1
lymph node
Project
178
AMP
Genome assembly (visualization)
37
GRCh38
27
hg19
Lab
140
AMP-T2D consortium
35
Patrick T. Ellinor, Broad
3
Bing Ren, UCSD
Audit category:
1
missing controlled_by
month_released!
June, 2018
May, 2021
organ_slims!
epithelium
files.file_type!
bam
BIOSAMPLE
ASSAY
178 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
35
left cardiac atrium
35
subcutaneous abdominal adipose tissue
31
liver
20
skeletal muscle tissue
19
+ See 9 more…
in vitro differentiated cells
adipocyte
12
neural progenitor cell
1
cell line
HepG2
3
See all biosamples
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