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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
34
ChIP-seq
10
ATAC-seq
4
DNase-seq
Assay category
54
Transcription
34
DNA binding
14
DNA accessibility
Target of assay
20
histone
20
histone modification
14
broad histone mark
9
control
6
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
66
February, 2021
26
October, 2019
5
May, 2019
3
July, 2019
2
June, 2019
Available data
102
bam
85
bigWig
74
bed narrowPeak
58
tsv
25
bigBed narrowPeak
6
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
102
Homo sapiens
Biosample type
66
cell line
34
tissue
2
primary cell
Organ
688
pancreas
681
liver
593
connective tissue
442
adipose tissue
316
epithelium
243
brain
211
heart
185
vasculature
180
blood vessel
144
kidney
114
limb
102
artery
66
bone element
60
blood
60
bodily fluid
57
musculature of body
42
nerve
36
embryo
24
spleen
20
vein
18
ureter
8
skeleton
7
eye
1
pericardium
1
pituitary gland
Project
102
AMP
Genome assembly (visualization)
93
GRCh38
93
hg19
Lab
102
AMP-T2D consortium
month_released!
June, 2018
BIOSAMPLE
ASSAY
102 results
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total RNA-seq
ChIP-seq
ATAC-seq
DNase-seq
cell line
smooth muscle cell of the coronary artery
52
6
8
tissue
tibial artery
23
1
2
coronary artery
5
1
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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