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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
103
ATAC-seq
5
DNase-seq
1
FAIRE-seq
Assay category
201
Transcription
123
DNA binding
109
DNA accessibility
53
DNA methylation
8
3D chromatin structure
Date released
39
May, 2022
16
May, 2021
June, 2019
14
September, 2018
12
February, 2023
7
August, 2020
7
October, 2019
5
September, 2017
3
August, 2017
3
September, 2020
2
March, 2020
1
November, 2019
Available data
40
bed narrowPeak
39
zippedFastqFolder
38
bigWig
32
fastq
28
bam
26
bigBed narrowPeak
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
1
tar
1
tsv
Organism
109
Homo sapiens
Biosample type
77
primary cell
20
cell line
12
tissue
Organ
169
pancreas
109
epithelium
85
kidney
51
blood vessel
51
vasculature
47
artery
47
heart
28
connective tissue
28
eye
27
liver
12
bone element
12
limb
12
skeleton
10
lung
9
blood
9
bodily fluid
7
adipose tissue
7
brain
3
nerve
3
vein
2
musculature of body
2
spleen
1
pituitary gland
1
skin of body
Project
60
AMP
49
HPAP
Genome assembly (visualization)
42
hg19
37
GRCh38
Lab
60
AMP-T2D consortium
49
Klaus Kaestner, Upenn
Audit category:
20
inconsistent ontology term
month_released!
June, 2019
BIOSAMPLE
ASSAY
109 results
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ATAC-seq
DNase-seq
FAIRE-seq
primary cell
pancreatic alpha cell
35
pancreatic beta cell
23
pancreatic acinar cell
9
pancreatic ductal cell
4
endothelial cell of umbilical vein
2
1
+ See 3 more…
cell line
EndoC_BH1
19
glomerular visceral epithelial cell
1
tissue
pigmented layer of retina
12
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