Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
ChIP-seq
2
WGBS
2
pCHi-C
1
ATAC-seq
1
DNase-seq
Assay category
24
DNA binding
2
DNA accessibility
2
DNA methylation
Target of assay
10
histone
10
histone modification
8
control
6
narrow histone mark
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
Date released
9
November, 2018
7
December, 2018
7
January, 2019
4
October, 2019
2
March, 2020
1
October, 2017
Available data
24
bam
24
fastq
16
bigWig
14
bed narrowPeak
13
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
2
tsv
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
30
Homo sapiens
Biosample type
30
tissue
Organ
888
pancreas
776
liver
649
connective tissue
483
epithelium
478
adipose tissue
358
heart
273
kidney
252
brain
229
vasculature
225
blood vessel
159
bone element
139
artery
90
limb
69
blood
69
bodily fluid
54
eye
53
musculature of body
43
nerve
36
embryo
25
spleen
22
vein
20
lung
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
30
AMP
Genome assembly (visualization)
16
GRCh38
14
hg19
Lab
30
AMP-T2D consortium
month_released!
June, 2019
audit.NOT_COMPLIANT.category!
missing controlled_by
BIOSAMPLE
ASSAY
30 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
WGBS
pCHi-C
ATAC-seq
DNase-seq
tissue
spleen
20
2
1
1
1
islet of Langerhans
4
ovary
1
Download