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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
Hi-C
Assay category
4
3D chromatin structure
Date released
3
July, 2019
1
October, 2019
Available data
2599
bam
2364
bigWig
1507
bed narrowPeak
1257
fastq
1122
tsv
819
bigBed narrowPeak
376
tagAlign
161
txt
153
zippedFastqFolder
131
bed broadPeak
95
bigBed broadPeak
65
bed bed3+
64
xls
33
bed bedMethyl
33
bigBed bedMethyl
23
hic
22
bedpe bed3+
8
csv
6
bed bed3
4
hdf5
4
tar
3
bed bedgraph
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
cell line
Organ
3
brain
2
blood vessel
2
epithelium
2
vasculature
connective tissue
1
liver
1
pancreas
Project
4
AMP
Genome assembly (visualization)
4
hg19
1
GRCh38
Lab
4
AMP-T2D consortium
Audit category:
1
inconsistent assembly
month_released!
June, 2019
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
4 results
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Hi-C
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
endothelial cell of hepatic sinusoid
1
cell line
Panc1
1
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