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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
ChIP-seq
6
total RNA-seq
2
small RNA-seq
1
ATAC-seq
1
WGBS
1
pCHi-C
Assay category
19
DNA binding
8
Transcription
1
DNA accessibility
1
DNA methylation
Target of assay
19
histone
19
histone modification
12
broad histone mark
7
narrow histone mark
Date released
June, 2019
13
August, 2017
6
May, 2019
5
July, 2019
3
March, 2020
2
February, 2020
1
January, 2018
Available data
27
bigWig
19
bed narrowPeak
15
tagAlign
14
bam
13
bed broadPeak
9
tsv
6
bigBed narrowPeak
4
bed bedMethyl
4
bigBed bedMethyl
2
bedpe bed3+
2
fastq
2
hic
1
bed bed3+
1
txt
Organism
30
Homo sapiens
Biosample type
28
tissue
2
primary cell
Organ
632
liver
628
pancreas
559
connective tissue
427
adipose tissue
292
epithelium
289
heart
206
brain
158
vasculature
155
blood vessel
87
artery
63
kidney
62
limb
58
bone element
55
blood
55
bodily fluid
32
nerve
30
musculature of body
29
embryo
17
spleen
15
vein
5
eye
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
30
AMP
Genome assembly (visualization)
26
hg19
12
GRCh38
Lab
30
AMP-T2D consortium
month_released!
June, 2019
BIOSAMPLE
ASSAY
30 results
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ChIP-seq
total RNA-seq
small RNA-seq
ATAC-seq
WGBS
pCHi-C
tissue
skeletal muscle tissue
13
1
1
1
muscle of leg
6
1
psoas muscle
2
1
gastrocnemius medialis
1
left ventricle myocardium
1
primary cell
skeletal muscle satellite cell
1
1
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