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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
62
total RNA-seq
2
single cell RNA-seq
2
small RNA-seq
1
pCHi-C
Assay category
66
Transcription
Date released
52
February, 2021
6
July, 2019
4
February, 2020
3
March, 2020
2
August, 2021
Available data
114
bam
110
bigWig
91
bed narrowPeak
67
tsv
29
bigBed narrowPeak
21
tagAlign
15
bed broadPeak
4
bed bedMethyl
4
bigBed bedMethyl
3
bed bed3+
2
bedpe bed3+
2
bigBed broadPeak
2
fastq
2
hic
1
txt
Organism
67
Homo sapiens
Biosample type
52
cell line
11
tissue
4
primary cell
Organ
478
connective tissue
417
pancreas
401
adipose tissue
174
liver
168
heart
156
epithelium
68
blood vessel
68
vasculature
58
artery
58
bone element
26
brain
24
kidney
14
embryo
9
musculature of body
7
limb
5
eye
5
nerve
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
67
AMP
Genome assembly (visualization)
60
GRCh38
60
hg19
Lab
67
AMP-T2D consortium
month_released!
June, 2019
BIOSAMPLE
ASSAY
67 results
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total RNA-seq
single cell RNA-seq
small RNA-seq
pCHi-C
cell line
smooth muscle cell of the coronary artery
52
tissue
psoas muscle
2
1
pulmonary artery
2
skeletal muscle tissue
1
1
coronary artery
1
gastrocnemius medialis
1
+ See 2 more…
primary cell
skeletal muscle satellite cell
1
1
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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