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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ChIP-seq
3
DNase-seq
1
ATAC-seq
Assay category
6
DNA binding
4
DNA accessibility
Target of assay
5
RNA binding protein
5
transcription factor
1
histone
1
histone modification
1
narrow histone mark
Date released
June, 2019
5
October, 2018
3
August, 2017
October, 2019
1
November, 2018
1
November, 2020
Available data
575
bam
552
bigWig
478
tsv
101
fastq
60
bed narrowPeak
22
tagAlign
21
bed bed3+
10
bigBed narrowPeak
6
bed bed3
4
bed bedgraph
4
bed broadPeak
3
bed bedMethyl
3
bigBed bedMethyl
3
bigBed broadPeak
1
bedpe bed3+
1
hdf5
Organism
10
Homo sapiens
Biosample type
8
tissue
1
in vitro differentiated cells
1
primary cell
Organ
356
liver
97
brain
80
pancreas
61
heart
54
blood
54
bodily fluid
44
epithelium
43
vasculature
41
blood vessel
23
kidney
13
spleen
10
connective tissue
8
adipose tissue
6
limb
6
musculature of body
3
artery
Project
10
AMP
Genome assembly (visualization)
10
GRCh38
10
hg19
Lab
10
AMP-T2D consortium
month_released!
June, 2019
October, 2019
BIOSAMPLE
ASSAY
10 results
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ChIP-seq
DNase-seq
ATAC-seq
tissue
omental fat pad
3
1
subcutaneous adipose tissue
2
1
adipose tissue
1
in vitro differentiated cells
adipocyte
1
primary cell
osteoblast
1
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