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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ChIP-seq
6
ATAC-seq
4
Hi-C
total RNA-seq
1
WGBS
Assay category
7
DNA binding
6
DNA accessibility
4
3D chromatin structure
1
DNA methylation
Target of assay
6
histone
6
histone modification
4
broad histone mark
2
narrow histone mark
1
control
Date released
October, 2019
June, 2019
7
May, 2019
6
February, 2021
5
July, 2019
Available data
14
bam
12
bed narrowPeak
7
bigWig
6
bigBed narrowPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
18
Homo sapiens
Biosample type
18
tissue
Organ
594
liver
521
pancreas
341
epithelium
280
heart
189
kidney
188
connective tissue
154
brain
121
vasculature
117
blood vessel
97
bone element
91
adipose tissue
69
blood
69
bodily fluid
57
artery
47
musculature of body
28
eye
25
spleen
23
embryo
20
lung
18
limb
12
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pericardium
1
small intestine
1
stomach
1
urinary bladder
1
vein
Project
18
AMP
Genome assembly (visualization)
12
GRCh38
12
hg19
Lab
18
AMP-T2D consortium
month_released!
June, 2019
October, 2019
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
18 results
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ChIP-seq
ATAC-seq
Hi-C
WGBS
tissue
muscle of leg
7
1
gastrocnemius medialis
4
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
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