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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ChIP-seq
6
ATAC-seq
4
Hi-C
3
total RNA-seq
1
WGBS
1
pCHi-C
Assay category
7
DNA binding
6
DNA accessibility
4
3D chromatin structure
3
Transcription
1
DNA methylation
Target of assay
6
histone
6
histone modification
4
broad histone mark
2
narrow histone mark
1
control
Date released
October, 2019
June, 2019
7
May, 2019
6
February, 2021
5
July, 2019
3
February, 2020
1
March, 2020
Available data
14
bam
12
bed narrowPeak
7
bigWig
6
bigBed narrowPeak
4
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
22
Homo sapiens
Biosample type
21
tissue
1
cell line
Organ
924
pancreas
782
liver
662
connective tissue
489
adipose tissue
469
epithelium
350
heart
243
kidney
182
vasculature
178
blood vessel
170
brain
159
bone element
113
artery
69
blood
69
bodily fluid
53
musculature of body
37
embryo
33
eye
25
spleen
21
limb
20
lung
16
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
nerve
1
ovary
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
1
vein
Project
22
AMP
Genome assembly (visualization)
12
GRCh38
12
hg19
Lab
22
AMP-T2D consortium
month_released!
June, 2019
October, 2019
BIOSAMPLE
ASSAY
22 results
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ChIP-seq
ATAC-seq
Hi-C
total RNA-seq
WGBS
pCHi-C
tissue
muscle of leg
7
1
gastrocnemius medialis
4
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
+ See 5 more…
cell line
MCF-7
1
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