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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
77
ChIP-seq
3
single cell RNA-seq
Assay category
77
DNA binding
3
Transcription
Target of assay
42
transcription factor
30
histone
30
histone modification
15
broad histone mark
15
narrow histone mark
5
control
4
RNA binding protein
3
chromatin remodeller
Date released
568
February, 2021
280
November, 2017
276
May, 2021
249
August, 2017
June, 2019
207
May, 2020
207
October, 2019
164
July, 2018
105
August, 2021
96
May, 2019
79
July, 2019
79
November, 2018
77
December, 2017
72
September, 2018
64
April, 2019
57
November, 2019
49
April, 2018
47
October, 2018
40
May, 2024
35
February, 2023
31
February, 2018
30
December, 2018
26
January, 2019
16
March, 2020
14
October, 2017
12
May, 2023
7
August, 2020
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
1
March, 2023
Available data
80
bam
80
fastq
75
bigWig
72
bed narrowPeak
50
bigBed narrowPeak
15
bed bed3+
3
tsv
Organism
80
Homo sapiens
Biosample type
38
in vitro differentiated cells
36
tissue
3
primary cell
3
stem cell
Organ
50
liver
17
epithelium
9
embryo
1
pancreas
Project
80
AMP
Genome assembly (visualization)
80
GRCh38
80
hg19
Lab
80
AMP-T2D consortium
Audit category:
27
inconsistent control
3
inconsistent ontology term
Audit category:
11
inconsistent control read length
month_released!
June, 2019
BIOSAMPLE
ASSAY
80 results
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Clear Filters
ChIP-seq
single cell RNA-seq
in vitro differentiated cells
hepatocyte
14
pancreatic endoderm
7
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
+ See 1 more…
tissue
liver
29
right lobe of liver
7
primary cell
pancreatic cell
1
pancreatic ductal cell
1
unclassified exocrine cell
1
stem cell
hESC
3
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