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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
133
ChIP-seq
Assay category
401
Transcription
133
DNA binding
16
DNA accessibility
6
DNA methylation
Target of assay
68
transcription factor
33
histone
33
histone modification
30
control
20
broad histone mark
15
RNA binding protein
13
narrow histone mark
10
chromatin remodeller
Date released
50
August, 2017
27
December, 2018
23
October, 2018
18
January, 2019
15
November, 2018
Available data
97
bam
97
fastq
73
bigWig
61
bed narrowPeak
60
bigBed narrowPeak
8
tagAlign
4
bed bed3+
1
bed broadPeak
Organism
133
Homo sapiens
Biosample type
73
tissue
60
cell line
Organ
552
liver
218
brain
218
pancreas
141
connective tissue
123
epithelium
102
vasculature
99
blood vessel
89
heart
73
adipose tissue
66
limb
60
blood
60
bodily fluid
49
kidney
35
nerve
34
artery
29
musculature of body
22
embryo
20
spleen
17
vein
4
gonad
4
ovary
2
eye
1
lymph node
1
pituitary gland
Project
133
AMP
Genome assembly (visualization)
73
hg19
72
GRCh38
Lab
133
AMP-T2D consortium
Audit category:
1
inconsistent control
Audit category:
12
missing controlled_by
month_released!
June, 2019
BIOSAMPLE
ASSAY
133 results
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Clear Filters
ChIP-seq
tissue
subcutaneous abdominal adipose tissue
36
subcutaneous adipose tissue
12
white adipose tissue
12
omental fat pad
11
adipose tissue
2
cell line
GM12878
60
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