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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
DNase-seq
4
ChIP-seq
Assay category
7
DNA accessibility
4
DNA binding
Target of assay
3
histone
3
histone modification
2
broad histone mark
1
RNA binding protein
1
narrow histone mark
1
transcription factor
Date released
June, 2019
6
October, 2019
2
November, 2017
1
August, 2017
1
November, 2018
1
November, 2020
Available data
750
bam
700
bigWig
546
tsv
184
bed narrowPeak
104
fastq
87
bigBed narrowPeak
28
tagAlign
27
bed bed3+
12
bed broadPeak
11
bigBed broadPeak
6
bed bed3
4
bed bedMethyl
4
bed bedgraph
4
bigBed bedMethyl
3
bedpe bed3+
3
hdf5
3
hic
1
tar
Organism
11
Homo sapiens
Biosample type
7
primary cell
3
tissue
1
in vitro differentiated cells
Organ
61
liver
10
vasculature
8
blood vessel
8
brain
8
epithelium
4
limb
4
vein
3
connective tissue
3
pancreas
2
artery
2
nerve
1
adipose tissue
1
spleen
Project
11
AMP
Genome assembly (visualization)
11
hg19
9
GRCh38
Lab
11
AMP-T2D consortium
month_released!
June, 2019
BIOSAMPLE
ASSAY
11 results
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DNase-seq
ChIP-seq
primary cell
endothelial cell of umbilical vein
2
2
brain microvascular endothelial cell
2
osteoblast
1
tissue
tibial artery
2
omental fat pad
1
in vitro differentiated cells
adipocyte
1
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