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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
57
total RNA-seq
8
ATAC-seq
6
ChIP-seq
2
RRBS
Assay category
57
Transcription
8
DNA accessibility
6
DNA binding
2
DNA methylation
Target of assay
4
transcription factor
2
control
Date released
66
February, 2021
June, 2019
6
July, 2019
1
May, 2021
Available data
71
bam
61
bigWig
57
tsv
12
bed narrowPeak
6
tagAlign
2
bed bedMethyl
2
bigBed bedMethyl
Organism
73
Homo sapiens
Biosample type
tissue
66
cell line
6
primary cell
1
in vitro differentiated cells
Organ
489
epithelium
441
pancreas
428
liver
120
connective tissue
99
vasculature
95
blood vessel
72
heart
69
blood
69
bodily fluid
68
artery
42
kidney
37
embryo
22
vein
16
brain
3
adipose tissue
3
musculature of body
1
bone element
1
bone marrow
1
eye
1
mammary gland
1
pericardium
Project
73
AMP
Genome assembly (visualization)
71
hg19
69
GRCh38
Lab
73
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
June, 2019
biosample_type!
tissue
BIOSAMPLE
ASSAY
73 results
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total RNA-seq
ATAC-seq
ChIP-seq
RRBS
cell line
smooth muscle cell of the coronary artery
52
8
6
primary cell
cardiac atrium fibroblast
1
cardiac fibroblast
1
cardiac ventricle fibroblast
1
endothelial cell of coronary artery
1
retinal pigment epithelial cell
1
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in vitro differentiated cells
cardiac fibroblast
1
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