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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ATAC-seq
19
total RNA-seq
4
pCHi-C
3
ChIP-seq
1
RRBS
Assay category
29
DNA accessibility
19
Transcription
3
DNA binding
1
DNA methylation
Target of assay
3
histone
3
histone modification
3
narrow histone mark
Date released
31
February, 2023
23
October, 2019
June, 2019
1
February, 2020
1
July, 2019
Available data
28
bed narrowPeak
5
tsv
1
bam
1
bed bedMethyl
1
bigBed bedMethyl
1
bigWig
1
tagAlign
Organism
56
Homo sapiens
Biosample type
55
tissue
1
primary cell
Organ
942
pancreas
789
liver
666
connective tissue
504
epithelium
490
adipose tissue
358
heart
273
kidney
256
brain
229
vasculature
225
blood vessel
159
bone element
139
artery
90
limb
69
blood
69
bodily fluid
54
eye
53
musculature of body
nerve
37
embryo
25
spleen
22
vein
20
lung
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
56
AMP
Genome assembly (visualization)
29
hg19
1
GRCh38
Lab
56
AMP-T2D consortium
month_released!
June, 2019
organ_slims!
nerve
BIOSAMPLE
ASSAY
56 results
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ATAC-seq
total RNA-seq
pCHi-C
ChIP-seq
RRBS
tissue
islet of Langerhans
2
14
4
2
retina
15
3
pigmented layer of retina
12
2
pituitary gland
1
primary cell
retinal pigment epithelial cell
1
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