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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
19
total RNA-seq
pCHi-C
2
ChIP-seq
1
RRBS
Assay category
28
DNA accessibility
19
Transcription
2
DNA binding
1
DNA methylation
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
31
February, 2023
17
October, 2019
June, 2019
1
February, 2020
1
July, 2019
Available data
27
bed narrowPeak
5
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
50
Homo sapiens
Biosample type
49
tissue
1
primary cell
Organ
933
pancreas
786
liver
660
connective tissue
503
epithelium
487
adipose tissue
355
heart
271
kidney
254
brain
228
vasculature
224
blood vessel
158
bone element
139
artery
90
limb
69
blood
69
bodily fluid
52
musculature of body
50
eye
43
nerve
37
embryo
24
spleen
22
vein
18
lung
16
skeleton
4
gonad
4
ovary
2
pericardium
2
pituitary gland
1
lymph node
1
skin of body
1
spinal cord
Project
50
AMP
Genome assembly (visualization)
28
hg19
Lab
50
AMP-T2D consortium
month_released!
June, 2019
assay_title!
pCHi-C
BIOSAMPLE
ASSAY
50 results
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ATAC-seq
total RNA-seq
ChIP-seq
RRBS
tissue
retina
15
3
islet of Langerhans
1
14
2
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
1
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