Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ChIP-seq
6
total RNA-seq
3
RRBS
2
DNase-seq
Assay category
12
DNA binding
6
Transcription
3
DNA methylation
2
DNA accessibility
Target of assay
9
histone
9
histone modification
5
broad histone mark
4
narrow histone mark
2
control
1
RNA binding protein
1
transcription factor
Date released
June, 2019
11
October, 2019
7
July, 2019
5
May, 2019
Available data
18
bam
16
bigWig
10
bed narrowPeak
6
tsv
4
bigBed narrowPeak
3
bed bedMethyl
3
bigBed bedMethyl
Organism
23
Homo sapiens
Biosample type
231
tissue
23
primary cell
19
cell line
Organ
386
epithelium
346
pancreas
33
vasculature
29
blood vessel
23
kidney
22
connective tissue
22
vein
16
brain
12
liver
8
blood
8
bodily fluid
5
heart
3
musculature of body
2
adipose tissue
2
artery
1
bone element
1
bone marrow
1
eye
1
pericardium
Project
23
AMP
Genome assembly (visualization)
19
hg19
16
GRCh38
Lab
23
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
month_released!
June, 2019
BIOSAMPLE
ASSAY
23 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
RRBS
DNase-seq
primary cell
epithelial cell of proximal tubule
7
1
1
kidney epithelial cell
5
1
1
kidney glomerular epithelial cell
1
1
kidney tubule cell
1
1
renal cortical epithelial cell
1
1
+ See 1 more…
See all biosamples
Download