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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
ChIP-seq
8
ATAC-seq
7
total RNA-seq
4
DNase-seq
4
Hi-C
1
WGBS
Assay category
17
DNA binding
12
DNA accessibility
7
Transcription
4
3D chromatin structure
1
DNA methylation
Target of assay
49
histone
histone modification
34
broad histone mark
17
control
15
narrow histone mark
Date released
June, 2019
26
October, 2019
6
February, 2021
5
July, 2019
3
February, 2020
1
May, 2019
Available data
34
bam
12
bed narrowPeak
11
bigWig
7
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
bigBed narrowPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
41
Homo sapiens
Biosample type
41
tissue
Organ
791
pancreas
686
liver
596
connective tissue
458
adipose tissue
413
epithelium
258
heart
244
kidney
159
bone element
158
vasculature
155
blood vessel
119
artery
69
brain
68
blood
68
bodily fluid
52
eye
41
limb
28
musculature of body
25
embryo
20
lung
19
nerve
19
spleen
16
skeleton
7
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
41
AMP
Genome assembly (visualization)
17
GRCh38
16
hg19
Lab
41
AMP-T2D consortium
month_released!
June, 2019
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
41 results
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ChIP-seq
ATAC-seq
total RNA-seq
DNase-seq
Hi-C
WGBS
tissue
tibial nerve
11
1
5
2
tibial artery
5
1
1
2
gastrocnemius medialis
1
4
muscle of leg
1
1
distal epiphysis of femur
1
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