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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
60
ChIP-seq
8
snATAC-seq
2
ATAC-seq
Assay category
60
DNA binding
10
DNA accessibility
Target of assay
51
transcription factor
10
RNA binding protein
10
chromatin remodeller
6
control
1
histone
1
histone modification
1
narrow histone mark
Date released
27
December, 2018
18
January, 2019
15
November, 2018
8
January, 2021
1
January, 2018
1
October, 2019
Available data
60
bam
60
fastq
55
bigWig
54
bed narrowPeak
54
bigBed narrowPeak
Organism
70
Homo sapiens
Biosample type
61
cell line
8
primary cell
1
tissue
Organ
598
liver
462
pancreas
323
epithelium
262
brain
229
kidney
227
heart
203
connective tissue
169
vasculature
163
blood vessel
115
limb
97
bone element
90
adipose tissue
87
musculature of body
83
artery
69
blood
69
bodily fluid
42
eye
38
nerve
25
spleen
23
embryo
22
vein
18
ureter
12
skeleton
11
lung
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
62
AMP
8
T1D
Genome assembly (visualization)
55
hg19
54
GRCh38
Lab
62
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
1
inconsistent control
month_released!
March, 2019
assay_slims!
Transcription
BIOSAMPLE
ASSAY
70 results
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ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
60
1
primary cell
peripheral blood mononuclear cell
8
tissue
islet of Langerhans
1
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