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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
102
ChIP-seq
2
WGBS
1
RRBS
Assay category
102
DNA binding
67
Transcription
58
DNA accessibility
5
3D chromatin structure
3
DNA methylation
Target of assay
71
histone
71
histone modification
45
broad histone mark
26
narrow histone mark
22
control
9
transcription factor
5
RNA binding protein
Date released
50
May, 2019
40
October, 2019
6
February, 2021
6
November, 2017
3
July, 2019
Available data
104
bam
80
bigWig
75
bed narrowPeak
71
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
6
fastq
6
tagAlign
2
bed bedMethyl
2
bigBed bedMethyl
Organism
105
Homo sapiens
Biosample type
75
tissue
24
primary cell
6
cell line
Organ
559
liver
271
pancreas
220
brain
182
epithelium
160
connective tissue
144
heart
105
vasculature
101
blood vessel
79
adipose tissue
67
limb
60
blood
60
bodily fluid
56
kidney
45
musculature of body
35
nerve
34
artery
22
embryo
22
spleen
17
vein
6
eye
4
gonad
4
ovary
1
lymph node
1
pericardium
1
pituitary gland
Project
105
AMP
Genome assembly (visualization)
80
hg19
76
GRCh38
Lab
105
AMP-T2D consortium
month_released!
March, 2019
BIOSAMPLE
ASSAY
105 results
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ChIP-seq
WGBS
RRBS
tissue
tibial artery
23
ascending aorta
16
thoracic aorta
16
aorta
13
2
coronary artery
5
primary cell
endothelial cell of umbilical vein
17
choroid plexus epithelial cell
3
1
brain microvascular endothelial cell
3
cell line
smooth muscle cell of the coronary artery
6
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