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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
134
ChIP-seq
8
WGBS
2
RRBS
Assay category
166
Transcription
134
DNA binding
77
DNA accessibility
10
DNA methylation
3
3D chromatin structure
Target of assay
97
histone
97
histone modification
57
broad histone mark
40
narrow histone mark
20
control
17
transcription factor
11
RNA binding protein
Date released
57
April, 2019
40
May, 2024
21
May, 2019
10
July, 2019
6
February, 2021
5
June, 2019
5
October, 2019
Available data
120
bigWig
114
bed narrowPeak
99
bam
64
bigBed narrowPeak
8
bed bedMethyl
8
bigBed bedMethyl
6
tagAlign
Organism
144
Homo sapiens
Biosample type
132
tissue
6
cell line
6
primary cell
Organ
559
liver
271
pancreas
220
brain
182
epithelium
160
connective tissue
144
heart
105
vasculature
101
blood vessel
79
adipose tissue
67
limb
60
blood
60
bodily fluid
56
kidney
45
musculature of body
35
nerve
34
artery
22
embryo
22
spleen
17
vein
6
eye
4
gonad
4
ovary
1
lymph node
1
pericardium
1
pituitary gland
Project
144
AMP
Genome assembly (visualization)
119
GRCh38
76
hg19
Lab
104
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
Audit category:
5
inconsistent ontology term
month_released!
March, 2019
BIOSAMPLE
ASSAY
144 results
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ChIP-seq
WGBS
RRBS
tissue
heart left ventricle
35
4
1
left cardiac atrium
40
heart
14
1
heart right ventricle
13
2
right atrium auricular region
10
+ See 2 more…
cell line
smooth muscle cell of the coronary artery
6
primary cell
cardiac fibroblast
5
1
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