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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1420
total RNA-seq
1387
ChIP-seq
498
ATAC-seq
363
single cell RNA-seq
210
DNase-seq
87
RNA microarray
84
snATAC-seq
74
WGBS
51
pCHi-C
29
Hi-C
21
RRBS
18
small RNA-seq
5
FAIRE-seq
5
GRO-seq
4
MeRIP-seq
3
snDrop-seq
2
Capture-C
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
DNAme array
Assay category
18
Transcription
Target of assay
2
control
2
nucleotide modification
Date released
18
July, 2019
4
November, 2020
Available data
18
bam
18
bigWig
18
tsv
Organism
22
Homo sapiens
Biosample type
20
tissue
cell line
2
primary cell
Organ
6
pancreas
4
brain
3
adipose tissue
3
connective tissue
3
liver
2
musculature of body
1
heart
1
kidney
Project
22
AMP
Genome assembly (visualization)
18
GRCh38
18
hg19
Lab
18
AMP-T2D consortium
4
Rohit N. Kulkarni, M.D., Ph.D.
month_released!
March, 2019
biosample_type!
cell line
BIOSAMPLE
ASSAY
22 results
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small RNA-seq
MeRIP-seq
tissue
islet of Langerhans
4
body of pancreas
2
right lobe of liver
2
cerebellum (Hemisphere)
1
diencephalon
1
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primary cell
mesenchymal stem cell of adipose
1
skeletal muscle satellite cell
1
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