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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
188
DNase-seq
Assay category
188
DNA accessibility
Date released
187
June, 2019
October, 2019
1
November, 2020
Available data
3141
bam
2962
bigWig
1628
bed narrowPeak
1584
tsv
fastq
972
bigBed narrowPeak
349
tagAlign
312
bed broadPeak
276
bigBed broadPeak
265
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
20
bedpe bed3+
18
hic
12
bed bed3
8
csv
7
bed bedgraph
4
hdf5
3
cool
3
tar
2
ibed
1
vcf
Organism
188
Homo sapiens
Biosample type
163
tissue
25
primary cell
Organ
78
kidney
33
musculature of body
32
limb
30
brain
30
heart
18
ureter
14
epithelium
7
connective tissue
7
vasculature
5
blood vessel
4
eye
4
pancreas
2
artery
2
liver
1
adipose tissue
Project
188
AMP
Genome assembly (visualization)
188
GRCh38
165
hg19
Lab
188
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
month_released!
March, 2019
October, 2019
files.file_type!
fastq
BIOSAMPLE
ASSAY
188 results
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DNase-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
brain
12
+ See 34 more…
primary cell
cardiac fibroblast
3
glomerular visceral epithelial cell
2
kidney tubule cell
2
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
+ See 16 more…
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