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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
193
DNase-seq
Assay category
193
DNA accessibility
Date released
187
June, 2019
5
October, 2019
1
November, 2020
Available data
3371
bam
3154
bigWig
1804
bed narrowPeak
1600
tsv
fastq
1029
bigBed narrowPeak
398
tagAlign
317
bed broadPeak
281
bigBed broadPeak
271
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
22
bedpe bed3+
20
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
3
cool
3
tar
2
ibed
1
tagAlign bed3+
1
vcf
Organism
193
Homo sapiens
Biosample type
167
tissue
25
primary cell
1
cell line
Organ
78
kidney
36
limb
33
musculature of body
30
brain
30
heart
18
epithelium
18
ureter
13
vasculature
11
blood vessel
7
connective tissue
5
pancreas
4
artery
4
eye
vein
2
liver
2
nerve
1
adipose tissue
Project
193
AMP
Genome assembly (visualization)
193
GRCh38
170
hg19
Lab
193
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
month_released!
March, 2019
files.file_type!
fastq
organ_slims!
vein
BIOSAMPLE
ASSAY
193 results
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Clear Filters
DNase-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
brain
12
+ See 36 more…
primary cell
cardiac fibroblast
3
glomerular visceral epithelial cell
2
kidney tubule cell
2
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
+ See 16 more…
cell line
Panc1
1
See all biosamples
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