Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
173
DNase-seq
15
ChIP-seq
Assay category
173
DNA accessibility
15
DNA binding
Target of assay
13
histone
13
histone modification
8
broad histone mark
5
narrow histone mark
2
RNA binding protein
2
transcription factor
1
chromatin remodeller
Date released
154
June, 2019
November, 2017
15
August, 2017
9
November, 2018
9
October, 2019
1
November, 2020
Available data
2942
bam
2767
bigWig
1591
tsv
1444
bed narrowPeak
1031
fastq
683
bigBed narrowPeak
305
tagAlign
239
bed bed3+
205
bed broadPeak
188
bigBed broadPeak
160
txt
153
zippedFastqFolder
64
xls
32
bed bedMethyl
32
bigBed bedMethyl
21
bedpe bed3+
20
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
3
cool
2
ibed
1
tagAlign bed3+
1
tar
1
vcf
Organism
188
Homo sapiens
Biosample type
144
tissue
42
primary cell
1
cell line
1
in vitro differentiated cells
Organ
78
kidney
36
limb
musculature of body
32
brain
30
heart
18
epithelium
18
ureter
13
vasculature
11
blood vessel
9
connective tissue
7
pancreas
5
liver
4
artery
4
eye
4
vein
2
adipose tissue
2
nerve
1
spleen
Project
188
AMP
Genome assembly (visualization)
184
GRCh38
165
hg19
Lab
188
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
Audit category:
1
inconsistent assembly
month_released!
March, 2019
November, 2017
organ_slims!
musculature of body
BIOSAMPLE
ASSAY
188 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
ChIP-seq
tissue
heart
18
brain
14
kidney
13
renal cortex interstitium
11
renal pelvis
10
+ See 35 more…
primary cell
skeletal muscle myoblast
1
13
endothelial cell of umbilical vein
2
2
cardiac fibroblast
3
glomerular visceral epithelial cell
2
kidney tubule cell
2
+ See 17 more…
cell line
Panc1
1
in vitro differentiated cells
adipocyte
1
See all biosamples
Download