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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
140
ChIP-seq
Assay category
140
DNA binding
Target of assay
124
histone
124
histone modification
65
broad histone mark
59
narrow histone mark
12
control
4
transcription factor
Date released
90
May, 2021
26
August, 2017
24
August, 2021
Available data
900
bam
872
bigWig
550
fastq
427
bed narrowPeak
401
tsv
153
zippedFastqFolder
140
tagAlign
126
bigBed narrowPeak
62
bed bed3+
50
bed broadPeak
50
bigBed broadPeak
11
bedpe bed3+
10
bed bedMethyl
10
bigBed bedMethyl
10
hic
7
bed bedgraph
6
bed bed3
4
hdf5
3
cool
3
txt
2
csv
2
ibed
1
tar
Organism
140
Homo sapiens
Biosample type
238
tissue
100
primary cell
40
in vitro differentiated cells
20
cell line
Organ
14
connective tissue
7
epithelium
4
liver
3
pancreas
Project
84
T1D
56
AMP
Genome assembly (visualization)
116
GRCh38
116
hg19
Lab
84
Kyle Gaulton, UCSD
56
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
Audit category:
1
inconsistent assembly
month_released!
March, 2019
BIOSAMPLE
ASSAY
140 results
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ChIP-seq
primary cell
monocyte
84
skeletal muscle myoblast
12
hepatocyte
4
in vitro differentiated cells
neural progenitor cell
20
adipocyte
14
cardiomyocytes
3
pancreatic PP cell
3
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