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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ATAC-seq
6
pCHi-C
Assay category
Transcription
7
DNA accessibility
Date released
7
March, 2020
6
February, 2023
Available data
85
txt
78
bam
63
bed narrowPeak
58
bigWig
24
bigBed narrowPeak
13
tsv
7
bedpe bed3+
6
bed bed3+
5
hic
4
bed broadPeak
4
bigBed broadPeak
4
fastq
3
tagAlign
2
bed bedMethyl
2
bigBed bedMethyl
2
ibed
1
bed bedgraph
Organism
13
Homo sapiens
Biosample type
6
primary cell
3
cell line
2
tissue
1
in vitro differentiated cells
1
stem cell
Organ
2
kidney
1
connective tissue
1
epithelium
1
pancreas
1
stomach
1
urinary bladder
Project
13
AMP
Genome assembly (visualization)
1
hg19
Lab
13
AMP-T2D consortium
Audit category:
13
inconsistent ontology term
2
audit script error
month_released!
March, 2019
assay_slims!
Transcription
BIOSAMPLE
ASSAY
13 results
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ATAC-seq
pCHi-C
primary cell
gabaergic neuron
3
microglial cell/astrocyte
3
cell line
EndoC_BH1
1
RCC 7860 VHL
1
RCC 7860 vector
1
tissue
bladder (urinary bladder)
1
gastric (mucosa of stomach)
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
stem cell
mesenchymal stem cell
1
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