Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
3
ATAC-seq
1
MPRA
1
snATAC-seq
Assay category
Transcription
4
DNA accessibility
Date released
84
February, 2021
3
February, 2023
1
May, 2022
1
October, 2022
Available data
1897
bam
1729
bed narrowPeak
1669
bigWig
1042
bigBed narrowPeak
943
fastq
321
bed broadPeak
314
tagAlign
285
bigBed broadPeak
271
bed bed3+
89
txt
64
xls
50
tsv
36
bed bedMethyl
36
bigBed bedMethyl
20
bedpe bed3+
18
hic
12
bed bed3
7
bed bedgraph
5
hdf5
4
tar
2
ibed
1
tagAlign bed3+
1
vcf
Organism
88
Homo sapiens
Biosample type
85
tissue
3
in vitro differentiated cells
1
cell line
Organ
84
bone element
1
musculature of body
Project
89
AMP
Genome assembly (visualization)
4
hg19
Lab
86
AMP-T2D consortium
3
Struan F.A. Grant, CHOP
Audit category:
85
inconsistent ontology term
1
audit script error
month_released!
March, 2019
assay_slims!
Transcription
BIOSAMPLE
ASSAY
89 results
search-icon
table-tab-icon
Clear Filters
RNA microarray
ATAC-seq
MPRA
snATAC-seq
tissue
bone element
84
skeletal muscle tissue
1
in vitro differentiated cells
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
cell line
MIN6
1
Download