Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
snATAC-seq
10
MeRIP-seq
total RNA-seq
1
ATAC-seq
1
DNase-seq
Assay category
18
DNA accessibility
Target of assay
5
control
5
nucleotide modification
Date released
406
November, 2017
322
August, 2017
284
October, 2019
245
August, 2021
218
June, 2019
217
May, 2021
174
May, 2022
170
February, 2021
151
May, 2020
120
May, 2019
112
February, 2023
94
December, 2017
88
November, 2018
80
April, 2019
74
October, 2018
64
July, 2019
49
April, 2018
49
March, 2020
48
July, 2018
47
September, 2018
47
September, 2023
43
September, 2020
41
November, 2019
40
May, 2024
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
19
April, 2020
16
January, 2021
14
May, 2023
12
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
5
December, 2019
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
2
bam
2
bed narrowPeak
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
1
bigWig
Organism
28
Homo sapiens
Biosample type
12
tissue
10
primary cell
6
cell line
Organ
18
pancreas
8
blood
8
bodily fluid
6
epithelium
2
connective tissue
Project
16
T1D
12
AMP
Genome assembly (visualization)
2
GRCh38
2
hg19
Lab
16
Kyle Gaulton, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
2
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
month_released!
March, 2019
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
28 results
search-icon
table-tab-icon
Clear Filters
snATAC-seq
MeRIP-seq
ATAC-seq
DNase-seq
tissue
islet of Langerhans
4
4
pancreas
4
primary cell
peripheral blood mononuclear cell
8
osteoblast
1
1
cell line
EndoC_BH1
6
Download