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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
119
ChIP-seq
Assay category
119
DNA binding
Target of assay
71
control
33
transcription factor
15
histone
15
histone modification
10
narrow histone mark
5
RNA binding protein
5
broad histone mark
Date released
214
August, 2021
200
May, 2022
170
February, 2023
162
August, 2017
147
February, 2021
134
May, 2020
123
May, 2021
119
November, 2017
107
October, 2019
56
September, 2020
48
March, 2020
47
September, 2023
29
July, 2019
29
October, 2018
25
February, 2020
24
May, 2019
19
April, 2020
16
April, 2019
16
December, 2017
16
January, 2021
10
November, 2020
8
February, 2018
8
January, 2018
8
June, 2019
8
November, 2018
8
October, 2017
5
December, 2018
5
December, 2019
4
January, 2019
4
July, 2018
4
March, 2023
4
November, 2019
4
October, 2022
4
September, 2017
March, 2019
3
May, 2023
1
August, 2018
1
August, 2022
1
September, 2018
Available data
105
bam
94
fastq
48
bigWig
26
bed narrowPeak
25
bigBed narrowPeak
24
tagAlign
15
bed broadPeak
14
bigBed broadPeak
3
tar
Organism
119
Homo sapiens
Biosample type
91
cell line
25
tissue
3
primary cell
Organ
91
liver
28
brain
2
epithelium
2
vasculature
1
blood vessel
Project
119
AMP
Genome assembly (visualization)
GRCh38
271
hg19
Lab
119
AMP-T2D consortium
Audit category:
missing controlled_by
Audit category:
3
inconsistent control read length
month_released!
March, 2019
assembly!
GRCh38
audit.NOT_COMPLIANT.category!
missing controlled_by
BIOSAMPLE
ASSAY
119 results
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Clear Filters
ChIP-seq
cell line
HepG2
91
tissue
cingulate gyrus
8
layer of hippocampus
6
substantia nigra
4
caudate nucleus
3
middle frontal area 46
3
+ See 1 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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