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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
155
ChIP-seq
Assay category
155
DNA binding
Target of assay
100
control
40
transcription factor
15
histone
15
histone modification
10
narrow histone mark
6
RNA binding protein
5
broad histone mark
2
chromatin remodeller
Date released
214
August, 2021
200
May, 2022
170
February, 2023
162
August, 2017
147
February, 2021
134
May, 2020
126
November, 2017
123
May, 2021
107
October, 2019
56
September, 2020
48
March, 2020
47
September, 2023
29
July, 2019
29
October, 2018
25
February, 2020
24
May, 2019
19
April, 2020
17
December, 2017
16
April, 2019
16
January, 2021
10
November, 2020
9
November, 2018
9
October, 2017
8
February, 2018
8
January, 2018
8
June, 2019
5
December, 2018
5
December, 2019
4
January, 2019
4
July, 2018
4
March, 2023
4
November, 2019
4
October, 2022
4
September, 2017
March, 2019
3
May, 2023
1
August, 2018
1
August, 2022
1
September, 2018
Available data
141
bam
128
fastq
55
bigWig
33
bed narrowPeak
32
bigBed narrowPeak
24
tagAlign
15
bed broadPeak
14
bigBed broadPeak
3
tar
Organism
155
Homo sapiens
Biosample type
98
cell line
54
tissue
3
primary cell
Organ
98
liver
28
brain
18
adipose tissue
18
connective tissue
11
pancreas
2
epithelium
2
vasculature
1
blood vessel
Project
155
AMP
Genome assembly (visualization)
328
hg19
GRCh38
Lab
155
AMP-T2D consortium
Audit category:
7
missing controlled_by
Audit category:
4
inconsistent control read length
2
inconsistent control run_type
month_released!
March, 2019
assembly!
GRCh38
BIOSAMPLE
ASSAY
155 results
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Clear Filters
ChIP-seq
cell line
HepG2
98
tissue
subcutaneous adipose tissue
10
body of pancreas
8
cingulate gyrus
8
omental fat pad
8
layer of hippocampus
6
+ See 6 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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