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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
120
ChIP-seq
Assay category
120
DNA binding
Target of assay
71
control
40
transcription factor
15
histone
15
histone modification
10
narrow histone mark
RNA binding protein
5
broad histone mark
2
chromatin remodeller
Date released
213
August, 2021
200
May, 2022
170
February, 2023
161
August, 2017
147
February, 2021
134
May, 2020
120
November, 2017
118
May, 2021
107
October, 2019
56
September, 2020
48
March, 2020
47
September, 2023
29
July, 2019
29
October, 2018
25
February, 2020
24
May, 2019
19
April, 2020
17
December, 2017
16
January, 2021
15
April, 2019
10
November, 2020
9
November, 2018
9
October, 2017
8
February, 2018
8
January, 2018
8
June, 2019
5
December, 2018
5
December, 2019
4
January, 2019
4
July, 2018
4
March, 2023
4
November, 2019
4
October, 2022
4
September, 2017
March, 2019
3
May, 2023
1
August, 2018
1
August, 2022
1
September, 2018
Available data
106
bam
95
fastq
51
bigWig
29
bed narrowPeak
28
bigBed narrowPeak
24
tagAlign
14
bed broadPeak
13
bigBed broadPeak
2
tar
Organism
120
Homo sapiens
Biosample type
92
cell line
25
tissue
3
primary cell
Organ
92
liver
28
brain
2
epithelium
2
vasculature
1
blood vessel
Project
120
AMP
Genome assembly (visualization)
GRCh38
247
hg19
Lab
120
AMP-T2D consortium
Audit category:
6
missing controlled_by
Audit category:
3
inconsistent control read length
1
inconsistent control run_type
month_released!
March, 2019
assembly!
GRCh38
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
120 results
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Clear Filters
ChIP-seq
cell line
HepG2
92
tissue
cingulate gyrus
8
layer of hippocampus
6
substantia nigra
4
caudate nucleus
3
middle frontal area 46
3
+ See 1 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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