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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
355
ChIP-seq
24
DNase-seq
Assay category
355
DNA binding
24
DNA accessibility
Target of assay
248
transcription factor
67
control
66
recombinant protein
41
RNA binding protein
37
histone
37
histone modification
21
narrow histone mark
16
broad histone mark
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
359
May, 2021
324
November, 2017
170
February, 2021
148
May, 2020
134
May, 2022
127
August, 2017
110
February, 2023
90
August, 2021
73
September, 2018
72
October, 2019
62
November, 2018
59
September, 2020
55
June, 2019
48
July, 2018
46
December, 2017
43
April, 2018
39
February, 2018
31
July, 2019
28
December, 2018
24
March, 2020
23
January, 2019
21
November, 2019
12
November, 2020
8
January, 2021
7
August, 2020
7
December, 2019
6
January, 2018
5
March, 2023
5
May, 2019
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
Available data
378
bam
324
bigWig
324
fastq
302
bed narrowPeak
302
bigBed narrowPeak
88
bed broadPeak
88
bigBed broadPeak
24
bed bed3+
12
tagAlign
3
tar
Organism
379
Homo sapiens
Biosample type
315
cell line
tissue
64
primary cell
Organ
317
liver
26
epithelium
17
connective tissue
14
brain
13
kidney
11
musculature of body
10
vasculature
8
heart
5
blood vessel
4
eye
Project
379
AMP
Genome assembly (visualization)
315
hg19
270
GRCh38
Lab
379
AMP-T2D consortium
Audit category:
25
inconsistent ontology term
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
month_released!
March, 2019
biosample_type!
tissue
BIOSAMPLE
ASSAY
379 results
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Clear Filters
ChIP-seq
DNase-seq
cell line
HepG2
315
primary cell
cardiac fibroblast
5
3
skeletal muscle satellite cell
8
mesenchymal stem cell
7
astrocyte of the cerebellum
3
1
brain microvascular endothelial cell
3
1
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