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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
RRBS
17
WGBS
1
whole genome sequencing assay
Assay category
36
DNA methylation
1
DNA sequencing
Date released
23
July, 2019
7
November, 2018
6
August, 2017
1
August, 2021
Available data
3325
bam
3111
bigWig
1809
bed narrowPeak
1542
tsv
1357
fastq
1042
bigBed narrowPeak
398
tagAlign
321
bed broadPeak
285
bigBed broadPeak
273
bed bed3+
153
zippedFastqFolder
73
txt
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
22
hic
8
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
tagAlign bed3+
1
vcf
Organism
37
Homo sapiens
Biosample type
25
tissue
10
primary cell
2
cell line
Organ
8
heart
6
epithelium
6
pancreas
4
kidney
4
liver
4
musculature of body
3
connective tissue
2
adipose tissue
2
brain
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
37
AMP
Genome assembly (visualization)
19
hg19
17
GRCh38
Lab
36
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
2
inconsistent ontology term
month_released!
March, 2019
organ_slims!
bone element
BIOSAMPLE
ASSAY
37 results
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RRBS
WGBS
whole genome sequencing assay
tissue
heart left ventricle
1
2
pancreas
1
2
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 11 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 5 more…
cell line
HepG2
1
1
See all biosamples
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