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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
45
ATAC-seq
34
ChIP-seq
2
single cell RNA-seq
Assay category
45
DNA accessibility
34
DNA binding
2
Transcription
Target of assay
20
histone
20
histone modification
14
broad histone mark
9
control
6
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
35
February, 2023
24
October, 2019
14
February, 2021
5
May, 2019
2
August, 2021
1
July, 2019
Available data
74
bed narrowPeak
48
bam
31
bigWig
25
bigBed narrowPeak
6
tagAlign
4
bed bed3+
4
bed broadPeak
bigBed broadPeak
2
tsv
Organism
81
Homo sapiens
Biosample type
67
tissue
14
cell line
Organ
539
liver
531
pancreas
371
epithelium
291
heart
231
brain
216
kidney
201
connective tissue
158
vasculature
156
blood vessel
97
bone element
91
adipose tissue
81
artery
79
limb
69
blood
69
bodily fluid
57
musculature of body
38
eye
36
nerve
24
spleen
23
embryo
20
lung
18
vein
12
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
81
AMP
Genome assembly (visualization)
70
GRCh38
35
hg19
Lab
81
AMP-T2D consortium
month_released!
March, 2019
assay_title!
total RNA-seq
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
81 results
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ATAC-seq
ChIP-seq
single cell RNA-seq
tissue
coronary artery
36
5
tibial artery
1
23
pulmonary artery
2
cell line
smooth muscle cell of the coronary artery
8
6
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