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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
25
ChIP-seq
4
DNase-seq
2
ATAC-seq
Assay category
25
DNA binding
6
DNA accessibility
Target of assay
20
histone
20
histone modification
14
broad histone mark
6
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
21
October, 2019
4
February, 2021
3
May, 2019
2
June, 2019
1
July, 2019
Available data
74
bed narrowPeak
48
bam
31
bigWig
25
bigBed narrowPeak
6
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
2
tsv
Organism
31
Homo sapiens
Biosample type
27
tissue
4
cell line
Organ
463
liver
293
pancreas
225
epithelium
217
brain
155
heart
120
kidney
103
connective tissue
97
vasculature
92
blood vessel
87
limb
64
musculature of body
55
blood
55
bodily fluid
31
artery
30
adipose tissue
27
nerve
18
ureter
16
spleen
15
embryo
15
vein
6
eye
1
pituitary gland
Project
31
AMP
Genome assembly (visualization)
31
GRCh38
31
hg19
Lab
31
AMP-T2D consortium
month_released!
March, 2019
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
31 results
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ChIP-seq
DNase-seq
ATAC-seq
tissue
tibial artery
18
2
1
coronary artery
3
2
1
cell line
smooth muscle cell of the coronary artery
4
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