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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
2
ATAC-seq
2
WGBS
1
DNase-seq
Assay category
66
DNA binding
3
DNA accessibility
2
DNA methylation
Target of assay
57
transcription factor
10
RNA binding protein
10
chromatin remodeller
7
histone
7
histone modification
4
broad histone mark
3
narrow histone mark
3
other context
3
other post-translational modification
Date released
30
December, 2018
21
January, 2019
18
November, 2018
1
January, 2018
1
October, 2017
Available data
84
bam
84
fastq
71
bigWig
68
bed narrowPeak
67
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
71
Homo sapiens
Biosample type
55
cell line
16
tissue
Organ
623
pancreas
622
liver
570
connective tissue
425
adipose tissue
301
epithelium
224
heart
222
brain
155
vasculature
150
blood vessel
131
kidney
91
limb
85
artery
68
musculature of body
58
bone element
55
blood
55
bodily fluid
31
nerve
29
embryo
18
ureter
16
spleen
15
vein
6
eye
1
pericardium
1
pituitary gland
Project
71
AMP
Genome assembly (visualization)
70
GRCh38
69
hg19
Lab
71
AMP-T2D consortium
Audit category:
1
inconsistent control
month_released!
March, 2019
BIOSAMPLE
ASSAY
71 results
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Clear Filters
ChIP-seq
ATAC-seq
WGBS
DNase-seq
cell line
GM12878
54
1
tissue
spleen
12
1
2
1
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