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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
ChIP-seq
Assay category
75
DNA binding
Target of assay
75
histone
75
histone modification
39
narrow histone mark
36
broad histone mark
29
control
27
transcription factor
7
RNA binding protein
1
chromatin remodeller
Date released
August, 2017
24
December, 2017
21
May, 2021
16
February, 2018
14
August, 2021
Available data
54
bam
53
bed narrowPeak
53
bigWig
40
fastq
14
tagAlign
12
bigBed narrowPeak
8
bed bed3+
Organism
75
Homo sapiens
Biosample type
504
tissue
199
primary cell
75
in vitro differentiated cells
38
cell line
2
stem cell
Organ
15
epithelium
12
embryo
12
liver
1
pancreas
Project
75
AMP
Genome assembly (visualization)
53
GRCh38
52
hg19
Lab
55
AMP-T2D consortium
20
Kyle Gaulton, UCSD
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
7
inconsistent control read length
month_released!
March, 2019
August, 2017
BIOSAMPLE
ASSAY
75 results
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ChIP-seq
in vitro differentiated cells
embryonic stem cell
22
neural progenitor cell
14
hepatocyte
12
pancreatic endoderm
10
definitive endodermal cell
4
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