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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ChIP-seq
4
total RNA-seq
2
STARR-seq
2
pCHi-C
1
DNase-seq
Assay category
10
DNA binding
4
Transcription
1
DNA accessibility
Target of assay
7
recombinant protein
7
transcription factor
3
control
Date released
15
October, 2019
2
August, 2021
2
March, 2020
Available data
15
bam
12
bigWig
8
bed narrowPeak
6
tsv
1
bigBed narrowPeak
Organism
19
Homo sapiens
Biosample type
299
tissue
36
primary cell
19
cell line
Organ
401
liver
92
pancreas
79
epithelium
66
artery
66
blood vessel
66
heart
66
vasculature
61
blood
61
bodily fluid
19
kidney
8
embryo
1
mammary gland
Project
19
AMP
Genome assembly (visualization)
12
GRCh38
12
hg19
Lab
17
AMP-T2D consortium
2
Bing Ren, UCSD
Audit category:
15
inconsistent ontology term
month_released!
March, 2023
BIOSAMPLE
ASSAY
19 results
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ChIP-seq
total RNA-seq
STARR-seq
pCHi-C
DNase-seq
cell line
RCC 7860 HIF1a re-expression
4
1
RCC 7860 vector
3
1
1
RCC 7860 HIF2a over-expression
3
1
HEK293T
2
glomerular visceral epithelial cell
1
1
RCC 7860 VHL
1
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