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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
19
total RNA-seq
4
pCHi-C
1
ChIP-seq
1
RRBS
Assay category
28
DNA accessibility
19
Transcription
1
DNA binding
1
DNA methylation
Target of assay
2
histone
2
histone modification
narrow histone mark
1
control
Date released
31
February, 2023
19
October, 2019
1
February, 2020
1
July, 2019
1
June, 2019
Available data
32
bed narrowPeak
6
bam
bigBed narrowPeak
5
bigWig
5
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
53
Homo sapiens
Biosample type
51
tissue
2
primary cell
Organ
801
pancreas
628
connective tissue
470
adipose tissue
414
epithelium
387
liver
281
heart
245
kidney
159
bone element
152
vasculature
150
blood vessel
116
artery
75
brain
53
eye
42
musculature of body
37
limb
29
embryo
20
lung
17
nerve
16
skeleton
15
blood
15
bodily fluid
12
spleen
8
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
53
AMP
Genome assembly (visualization)
28
hg19
Lab
53
AMP-T2D consortium
month_released!
March, 2023
files.file_type!
bigBed narrowPeak
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
53 results
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ATAC-seq
total RNA-seq
pCHi-C
ChIP-seq
RRBS
tissue
islet of Langerhans
1
14
4
retina
15
3
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
1
1
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