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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
87
ChIP-seq
Assay category
87
DNA binding
Target of assay
244
transcription factor
88
histone
88
histone modification
71
control
66
recombinant protein
50
broad histone mark
38
narrow histone mark
37
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
117
August, 2017
87
November, 2017
81
May, 2021
63
May, 2019
55
October, 2019
41
April, 2019
30
October, 2018
25
May, 2024
21
November, 2018
19
December, 2017
17
September, 2018
12
June, 2019
10
August, 2021
10
January, 2019
10
October, 2017
8
February, 2018
7
November, 2019
2
December, 2018
Available data
83
bam
80
bed narrowPeak
80
bigBed narrowPeak
80
bigWig
45
fastq
41
tagAlign
17
bed broadPeak
15
bigBed broadPeak
1
tar
Organism
87
Homo sapiens
Biosample type
42
cell line
42
tissue
3
primary cell
Organ
45
brain
42
liver
2
epithelium
2
vasculature
1
blood vessel
Project
87
AMP
Genome assembly (visualization)
76
GRCh38
44
hg19
Lab
87
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
11
inconsistent control read length
2
inconsistent control run_type
month_released!
March, 2023
BIOSAMPLE
ASSAY
87 results
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Clear Filters
ChIP-seq
cell line
HepG2
42
tissue
layer of hippocampus
12
caudate nucleus
8
substantia nigra
8
cingulate gyrus
7
middle frontal area 46
7
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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