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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
RRBS
17
WGBS
1
FAIRE-seq
Assay category
36
DNA methylation
1
DNA accessibility
Target of assay
transcription factor
1
RNA binding protein
Date released
23
July, 2019
7
November, 2018
6
August, 2017
1
October, 2019
Available data
2650
bigWig
2601
bam
1597
tsv
1348
bed narrowPeak
736
fastq
637
bigBed narrowPeak
321
tagAlign
273
bed broadPeak
245
bed bed3+
236
bigBed broadPeak
161
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
22
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
tar
1
vcf
Organism
37
Homo sapiens
Biosample type
25
tissue
11
primary cell
1
cell line
Organ
8
heart
7
epithelium
6
pancreas
4
kidney
4
musculature of body
3
connective tissue
3
liver
3
vasculature
2
adipose tissue
2
blood vessel
2
brain
2
spleen
1
eye
1
limb
1
pericardium
1
vein
Project
37
AMP
Genome assembly (visualization)
20
hg19
17
GRCh38
Lab
37
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
month_released!
March, 2023
target.investigated_as!
control
transcription factor
BIOSAMPLE
ASSAY
37 results
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RRBS
WGBS
FAIRE-seq
tissue
heart left ventricle
1
2
pancreas
1
2
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 11 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
endothelial cell of umbilical vein
1
epithelial cell of proximal tubule
1
+ See 6 more…
cell line
HepG2
1
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