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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
ChIP-seq
Assay category
45
DNA binding
Target of assay
45
histone
45
histone modification
24
broad histone mark
21
narrow histone mark
13
control
3
transcription factor
Date released
19
August, 2017
8
June, 2019
6
December, 2017
6
February, 2018
6
May, 2019
Available data
38
bed narrowPeak
38
bigWig
26
bam
14
bigBed narrowPeak
13
bed broadPeak
13
tagAlign
12
fastq
2
bed bed3+
Organism
45
Homo sapiens
Biosample type
25
tissue
12
in vitro differentiated cells
8
primary cell
Organ
187
brain
151
pancreas
102
liver
97
heart
93
epithelium
78
connective tissue
71
vasculature
70
blood vessel
49
limb
33
musculature of body
32
adipose tissue
30
kidney
24
nerve
20
artery
15
vein
12
embryo
6
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
45
AMP
Genome assembly (visualization)
38
hg19
24
GRCh38
Lab
45
AMP-T2D consortium
Audit category:
9
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
2
inconsistent control read length
month_released!
March, 2023
BIOSAMPLE
ASSAY
45 results
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ChIP-seq
tissue
skeletal muscle tissue
19
muscle of leg
6
in vitro differentiated cells
pancreatic endoderm
10
Hepatic endoderm
2
primary cell
skeletal muscle satellite cell
7
skeletal muscle cell
1
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