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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
4
DNase-seq
Assay category
18
DNA binding
4
DNA accessibility
Target of assay
16
histone
16
histone modification
8
broad histone mark
8
narrow histone mark
2
RNA binding protein
2
transcription factor
Date released
22
June, 2019
May, 2019
Available data
209
bam
190
bigWig
150
tsv
85
txt
61
bed narrowPeak
22
bigBed narrowPeak
11
fastq
7
bedpe bed3+
6
bed bed3+
5
hic
4
bed broadPeak
4
bigBed broadPeak
3
tagAlign
2
bed bedMethyl
2
bigBed bedMethyl
2
ibed
1
bed bedgraph
Organism
22
Homo sapiens
Biosample type
21
primary cell
1
tissue
Organ
10
connective tissue
8
musculature of body
4
heart
3
epithelium
3
kidney
1
limb
1
vasculature
Project
22
AMP
Genome assembly (visualization)
22
GRCh38
22
hg19
Lab
22
AMP-T2D consortium
Audit category:
28
inconsistent control
22
inconsistent ontology term
month_released!
May, 2019
assay_title!
GRO-seq
BIOSAMPLE
ASSAY
22 results
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ChIP-seq
DNase-seq
primary cell
skeletal muscle satellite cell
7
mesenchymal stem cell
6
cardiac fibroblast
3
1
epithelial cell of proximal tubule
2
1
smooth muscle cell of the brain vasculature
1
tissue
muscle of leg
1
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