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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
62
ATAC-seq
8
total RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
single cell RNA-seq
Assay category
62
DNA accessibility
9
Transcription
Date released
670
February, 2021
411
August, 2017
406
November, 2017
296
May, 2020
293
October, 2019
211
June, 2019
168
July, 2018
164
May, 2021
151
August, 2021
May, 2019
107
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
72
February, 2023
64
March, 2020
61
November, 2019
49
April, 2018
39
February, 2018
35
December, 2018
30
January, 2019
24
February, 2020
22
October, 2017
11
September, 2017
10
December, 2019
6
November, 2020
4
August, 2018
3
January, 2018
3
June, 2018
2
May, 2022
1
August, 2022
1
May, 2023
1
October, 2022
Available data
36
bed narrowPeak
12
tsv
10
bed bed3
4
bed bed3+
4
txt
Organism
71
Homo sapiens
Biosample type
46
tissue
13
in vitro differentiated cells
12
primary cell
1
cell line
Organ
36
heart
35
artery
35
blood vessel
35
vasculature
eye
15
epithelium
14
connective tissue
8
bone element
8
skeleton
1
adipose tissue
1
brain
1
pancreas
Project
72
AMP
Genome assembly (visualization)
35
GRCh38
15
hg19
Lab
76
Klaus Kaestner, Upenn
72
AMP-T2D consortium
23
Kyle Gaulton, UCSD
3
Struan F.A. Grant, CHOP
Audit category:
10
inconsistent ontology term
month_released!
May, 2019
assembly!
hg18
organ_slims!
eye
BIOSAMPLE
ASSAY
72 results
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Clear Filters
ATAC-seq
total RNA-seq
CRISPR genome editing followed by sgRNA sequencing
single cell RNA-seq
tissue
coronary artery
35
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
pubis
1
1
+ See 3 more…
in vitro differentiated cells
chondrocyte
5
immature adipocyte
2
2
adipocyte
1
1
preadipocyte
1
1
primary cell
gabaergic neuron
3
glutamatergic neuron
3
microglial cell/astrocyte
3
oligodendrocyte
3
cell line
EndoC_BH1
1
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