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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ChIP-seq
Assay category
26
DNA binding
Target of assay
317
transcription factor
89
recombinant protein
83
control
61
RNA binding protein
26
chromatin remodeller
24
histone
24
histone modification
13
narrow histone mark
11
broad histone mark
3
nucleotide modification
1
other context
1
other post-translational modification
Date released
11
November, 2017
7
November, 2018
6
January, 2019
2
December, 2018
Available data
30
bam
30
bed narrowPeak
30
bigBed narrowPeak
30
bigWig
30
fastq
bed broadPeak
4
bigBed broadPeak
Organism
26
Homo sapiens
Biosample type
26
cell line
3
in vitro differentiated cells
2
tissue
Organ
16
liver
10
blood
10
bodily fluid
Project
26
AMP
Genome assembly (visualization)
26
hg19
24
GRCh38
Lab
26
AMP-T2D consortium
Audit category:
1
inconsistent control
Audit category:
6
missing controlled_by
Audit category:
10
inconsistent control read length
8
inconsistent control run_type
month_released!
May, 2019
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
26 results
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ChIP-seq
cell line
HepG2
16
GM12878
10
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