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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
396
total RNA-seq
12
ChIP-seq
3
small RNA-seq
2
WGBS
Assay category
399
Transcription
12
DNA binding
2
DNA methylation
Target of assay
12
transcription factor
Date released
386
February, 2021
14
August, 2017
12
July, 2019
1
May, 2023
Available data
423
bam
422
bigWig
398
tsv
23
fastq
bed narrowPeak
9
bigBed narrowPeak
6
bed bed3+
2
bed bedMethyl
2
bed broadPeak
2
bigBed bedMethyl
2
bigBed broadPeak
Organism
413
Homo sapiens
Biosample type
411
tissue
2
primary cell
Organ
495
connective tissue
447
pancreas
413
adipose tissue
164
liver
156
epithelium
76
heart
59
blood vessel
59
vasculature
58
bone element
54
artery
23
kidney
16
brain
15
embryo
7
musculature of body
5
limb
4
nerve
2
spleen
1
pericardium
Project
413
AMP
Genome assembly (visualization)
413
GRCh38
413
hg19
Lab
413
AMP-T2D consortium
Audit category:
12
missing controlled_by
month_released!
May, 2019
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
413 results
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total RNA-seq
ChIP-seq
small RNA-seq
WGBS
tissue
adipose tissue
382
2
white adipose tissue
12
subcutaneous adipose tissue
6
1
omental fat pad
4
1
visceral abdominal adipose tissue
3
primary cell
mesenchymal stem cell of adipose
1
1
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