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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ChIP-seq
Assay category
12
DNA binding
Target of assay
168
control
32
transcription factor
19
histone
19
histone modification
12
narrow histone mark
7
broad histone mark
3
RNA binding protein
1
recombinant protein
Date released
10
August, 2017
1
December, 2017
1
November, 2017
Available data
406
bigWig
bed narrowPeak
371
bam
174
tagAlign
115
bigBed narrowPeak
110
fastq
29
bed broadPeak
14
bigBed broadPeak
13
bed bed3+
1
tagAlign bed3+
Organism
12
Homo sapiens
Biosample type
8
primary cell
2
tissue
1
cell line
1
in vitro differentiated cells
Organ
10
pancreas
1
embryo
1
liver
Project
12
AMP
Genome assembly (visualization)
11
hg19
10
GRCh38
Lab
12
AMP-T2D consortium
Audit category:
11
missing controlled_by
Audit category:
1
inconsistent control read length
month_released!
May, 2019
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
12 results
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ChIP-seq
primary cell
pancreatic endocrine cell
8
tissue
islet of Langerhans
2
cell line
HepG2
1
in vitro differentiated cells
pancreatic endoderm
1
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