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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
43
ATAC-seq
7
ChIP-seq
single cell RNA-seq
2
total RNA-seq
Assay category
43
DNA accessibility
7
DNA binding
2
Transcription
Target of assay
7
control
Date released
35
February, 2023
10
February, 2021
5
October, 2019
2
February, 2020
May, 2019
Available data
97
bam
bigWig
71
bed narrowPeak
56
tsv
22
bigBed narrowPeak
6
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
52
Homo sapiens
Biosample type
42
tissue
10
cell line
Organ
322
pancreas
222
epithelium
168
liver
158
kidney
114
connective tissue
101
bone element
70
heart
66
adipose tissue
64
vasculature
63
blood vessel
61
brain
55
eye
52
artery
30
limb
26
musculature of body
16
skeleton
14
blood
14
bodily fluid
12
nerve
11
lung
9
spleen
8
embryo
7
vein
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
52
AMP
Genome assembly (visualization)
43
GRCh38
8
hg19
Lab
52
AMP-T2D consortium
month_released!
May, 2019
files.file_type!
bigWig
assay_title!
single cell RNA-seq
BIOSAMPLE
ASSAY
52 results
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ATAC-seq
ChIP-seq
total RNA-seq
tissue
coronary artery
35
1
tibial artery
5
1
cell line
smooth muscle cell of the coronary artery
8
2
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